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Or3a1c olfactory receptor family 3 subfamily A member 1C [ Mus musculus (house mouse) ]

Gene ID: 258703, updated on 9-Dec-2024

Summary

Official Symbol
Or3a1cprovided by MGI
Official Full Name
olfactory receptor family 3 subfamily A member 1Cprovided by MGI
Primary source
MGI:MGI:3030236
See related
Ensembl:ENSMUSG00000070379 AllianceGenome:MGI:3030236
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Olfr402; MOR255-4
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
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Genomic context

See Or3a1c in Genome Data Viewer
Location:
11 B5; 11 45.76 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (74045982..74046929)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (74155156..74156103)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 3 subfamily A member 15, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_29945 Neighboring gene STARR-seq mESC enhancer starr_29946 Neighboring gene olfactory receptor family 3 subfamily A member 1B Neighboring gene STARR-seq mESC enhancer starr_29947 Neighboring gene olfactory receptor family 1 subfamily A member 1 Neighboring gene olfactory receptor family 1 subfamily A member 1B

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity ISO
Inferred from Sequence Orthology
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within sensory perception of smell ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in membrane ISO
Inferred from Sequence Orthology
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
olfactory receptor family 3 subfamily A member 1C
Names
GA_x6K02T2P1NL-4307199-4308146
olfactory receptor 402
olfactory receptor MOR255-4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146708.1NP_666919.1  olfactory receptor family 3 subfamily A member 1C

    See identical proteins and their annotated locations for NP_666919.1

    Status: PROVISIONAL

    Source sequence(s)
    AY073387
    Consensus CDS
    CCDS25026.1
    UniProtKB/TrEMBL
    Q8VFX8
    Related
    ENSMUSP00000073356.3, ENSMUST00000073675.5
    Conserved Domains (2) summary
    pfam00001
    Location:44293
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:34308
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    74045982..74046929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)