U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Trh thyrotropin releasing hormone [ Rattus norvegicus (Norway rat) ]

Gene ID: 25569, updated on 27-Nov-2024

Summary

Official Symbol
Trhprovided by RGD
Official Full Name
thyrotropin releasing hormoneprovided by RGD
Primary source
RGD:3903
See related
EnsemblRapid:ENSRNOG00000011824 AllianceGenome:RGD:3903
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
THR; Trf; TRH01; Pro-TRH
Summary
This gene encodes a member of the thyrotropin-releasing hormone family. Cleavage of the encoded proprotein releases mature thyrotropin-releasing hormone, which is a tripeptide hypothalamic regulatory hormone. The rat proprotein contains five thyrotropin-releasing hormone tripeptides. Thyrotropin-releasing hormone is involved in the regulation and release of thyroid-stimulating hormone, as well as prolactin, and may be involved in cardiac function in heart failure. Disruption of this gene is associated with hypothyroidism, elevated thyroid-stimulating hormone levels, and hyperglycemia. [provided by RefSeq, May 2013]
Expression
Biased expression in Brain (RPKM 29.7), Testes (RPKM 9.2) and 3 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Trh in Genome Data Viewer
Location:
4q34
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (126299236..126301762, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (124742111..124777094, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (124110716..124113242, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103692187 Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene uncharacterized LOC134486818 Neighboring gene rabenosyn, RAB effector Neighboring gene prickle planar cell polarity protein 2 Neighboring gene uncharacterized LOC134486613 Neighboring gene uncharacterized LOC134486616

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables thyrotropin-releasing hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables thyrotropin-releasing hormone activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within adult walking behavior ISO
Inferred from Sequence Orthology
more info
 
involved_in eating behavior IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in eating behavior IDA
Inferred from Direct Assay
more info
PubMed 
involved_in histamine metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in histamine metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of feeding behavior IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of glutamate secretion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of glutamate secretion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of gamma-aminobutyric acid secretion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of gamma-aminobutyric acid secretion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of insulin secretion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of insulin secretion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to corticosterone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to ethanol IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to glucose IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to hypoxia IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to organic cyclic compound IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in secretory granule IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in secretory granule IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
thyrotropin releasing hormone
Names
TSH-releasing factor
pro-thyrotropin-releasing hormone
prothyroliberin
protirelin
thyrotropin-releasing factor

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013046.3NP_037178.1  thyrotropin releasing hormone preproprotein

    Status: REVIEWED

    Source sequence(s)
    FQ100942, FQ221609, FQ223091
    UniProtKB/Swiss-Prot
    P01150
    UniProtKB/TrEMBL
    B1WBP2
    Related
    ENSRNOP00000015944.2, ENSRNOT00000015944.7
    Conserved Domains (1) summary
    pfam05438
    Location:6222
    TRH; Thyrotropin-releasing hormone (TRH)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    126299236..126301762 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)