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dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543461, updated on 18-Sep-2024

Summary

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Official Full Name
dehydrogenase
Primary source
PomBase:SPAC521.03
Locus tag
SPOM_SPAC521.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (844921..846142)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene transcription factor TFIID complex, histone acetyltransferase subunit Taf111 Neighboring gene ncRNA Neighboring gene RNA methyltransferase Tgs1 Neighboring gene DNA repair WLM domain metallopeptidase Wss1 Neighboring gene calcium permease Neighboring gene ncRNA Neighboring gene 40S ribosomal protein eS8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
  2. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
dehydrogenase
NP_593098.1
  • short chain dehydrogenase, human DHRS7 family(predicted)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    844921..846142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018495.3 → NP_593098.1  dehydrogenase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593098.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P7B4
    Conserved Domains (2) summary
    cd05346
    Location:7 → 256
    SDR_c5; classical (c) SDR, subgroup 5
    COG4221
    Location:1 → 249
    YdfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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