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ure4 urease accessory protein UreD [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543072, updated on 18-Sep-2024

Summary

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Official Symbol
ure4
Official Full Name
urease accessory protein UreD
Primary source
PomBase:SPAC3A12.09c
Locus tag
SPOM_SPAC3A12.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ure4 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1435842..1437482, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mitochondrial ribosomal protein subunit L27 Neighboring gene uncharacterized protein Neighboring gene DNA-directed RNA polymerase II complex subunit Rpb11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein eL20 Neighboring gene ncRNA Neighboring gene zf-CCCH type zinc finger protein, Prp19 complex subunit, RNA-binding Cwf2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional expression of a heterologous nickel-dependent, ATP-independent urease in Saccharomyces cerevisiae. Milne N, et al. Metab Eng, 2015 Jul. PMID 26037463
  2. Structure of UreG/UreF/UreH complex reveals how urease accessory proteins facilitate maturation of Helicobacter pylori urease. Fong YH, et al. PLoS Biol, 2013 Oct. PMID 24115911, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables nickel cation binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein maturation by nickel ion transfer ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in urea metabolic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
urease accessory protein UreD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1435842..1437482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018767.3 → NP_593335.1  urease accessory protein UreD [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593335.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P87125
    Conserved Domains (1) summary
    COG0829
    Location:1 → 289
    UreH; Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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