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qtr1 queuine tRNA-ribosyltransferase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542133, updated on 18-Sep-2024

Summary

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Official Symbol
qtr1
Official Full Name
queuine tRNA-ribosyltransferase
Primary source
PomBase:SPAC1687.19c
Locus tag
SPOM_SPAC1687.19C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
qtrt1
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Genomic context

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See qtr1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (938311..939769, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene Der1 family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cohesin loading factor Ssl3 Neighboring gene ncRNA Neighboring gene centromere connector protein mis6 Neighboring gene fructose-2,6-bisphosphatase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plant, animal, and fungal micronutrient queuosine is salvaged by members of the DUF2419 protein family. Zallot R, et al. ACS Chem Biol, 2014 Aug 15. PMID 24911101, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables tRNA-guanosine(34) queuine transglycosylase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in tRNA-guanine transglycosylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA-guanine transglycosylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
queuine tRNA-ribosyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    938311..939769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018534.3 → NP_593138.1  queuine tRNA-ribosyltransferase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593138.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94460
    Conserved Domains (2) summary
    COG0343
    Location:15 → 388
    Tgt; Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis]
    cl19224
    Location:6 → 378
    TGT; Queuine tRNA-ribosyltransferase
Nucleotide Protein
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