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arp9 SWI/SNF and RSC complex subunit Arp9 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541540, updated on 14-Nov-2024

Summary

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Official Symbol
arp9
Official Full Name
SWI/SNF and RSC complex subunit Arp9
Primary source
PomBase:SPAC1071.06
Locus tag
SPOM_SPAC1071.06
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See arp9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (3866533..3868410)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ribosome methytransferase Hpm1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative DNAJC9 family protein Neighboring gene 40S ribosomal protein uS19 Neighboring gene ribosomal protein P2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genetic screen for functional partners of condensin in fission yeast. Robellet X, et al. G3 (Bethesda), 2014 Feb 19. PMID 24362309, Free PMC Article
  2. Fission yeast SWI/SNF and RSC complexes show compositional and functional differences from budding yeast. Monahan BJ, et al. Nat Struct Mol Biol, 2008 Aug. PMID 18622392, Free PMC Article
  3. Widespread cotranslational formation of protein complexes. Duncan CD, et al. PLoS Genet, 2011 Dec. PMID 22144913, Free PMC Article
  4. Rbm10 facilitates heterochromatin assembly via the Clr6 HDAC complex. Weigt M, et al. Epigenetics Chromatin, 2021 Jan 19. PMID 33468217, Free PMC Article
  5. Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries. Wang J, et al. Genes Dev, 2013 Sep 1. PMID 24013502, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II TAS
Traceable Author Statement
more info
 PubMed 
involved_in transcription initiation-coupled chromatin remodeling IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of RSC-type complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of SWI/SNF complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
SWI/SNF and RSC complex subunit Arp9

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3866533..3868410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019777.3 → NP_594356.1  SWI/SNF and RSC complex subunit Arp9 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594356.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTQ7
    Conserved Domains (1) summary
    COG5277
    Location:26 → 523
    COG5277; Actin-related protein [Cytoskeleton]
Nucleotide Protein
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