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dps1 decaprenyl diphosphate synthase subunit Dps1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541402, updated on 18-Sep-2024

Summary

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Official Symbol
dps1
Official Full Name
decaprenyl diphosphate synthase subunit Dps1
Primary source
PomBase:SPBPJ4664.01
Locus tag
SPOM_SPBPJ4664.01
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPBPJ694.01
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Genomic context

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See dps1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (684117..685682)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene AAA family ATPase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene glycoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Heteromer formation of a long-chain prenyl diphosphate synthase from fission yeast Dps1 and budding yeast Coq1. Zhang M, et al. FEBS J, 2008 Jul. PMID 18540885
  2. Fission yeast decaprenyl diphosphate synthase consists of Dps1 and the newly characterized Dlp1 protein in a novel heterotetrameric structure. Saiki R, et al. Eur J Biochem, 2003 Oct. PMID 14519123
  3. Analysis of the decaprenyl diphosphate synthase (dps) gene in fission yeast suggests a role of ubiquinone as an antioxidant. Suzuki K, et al. J Biochem, 1997 Mar. PMID 9133618
  4. A subunit of decaprenyl diphosphate synthase stabilizes octaprenyl diphosphate synthase in Escherichia coli by forming a high-molecular weight complex. Cui TZ, et al. FEBS Lett, 2010 Feb 19. PMID 20051244
  5. Functional conservation of coenzyme Q biosynthetic genes among yeasts, plants, and humans. Hayashi K, et al. PLoS One, 2014. PMID 24911838, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data show that expression of either dlp1 or dps1 recovered the thermo-sensitive growth of an E. coli ispB(R321A) mutant and restored IspB activity and production of Coenzyme Q-8.
    Title: A subunit of decaprenyl diphosphate synthase stabilizes octaprenyl diphosphate synthase in Escherichia coli by forming a high-molecular weight complex.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables all-trans-decaprenyl-diphosphate synthase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables prenyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in farnesyl diphosphate biosynthetic process, mevalonate pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in isoprenoid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in isoprenoid biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in isoprenoid biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in ubiquinone biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ubiquinone biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of heterotetrameric polyprenyl diphosphate synthase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
part_of polyprenyl diphosphate synthase complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
decaprenyl diphosphate synthase subunit Dps1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    684117..685682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021183.3 → NP_595276.1  decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595276.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43091, P78914, Q96WV7
    Conserved Domains (1) summary
    COG0142
    Location:35 → 378
    IspA; Geranylgeranyl pyrophosphate synthase [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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