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rmn1 MTREC (exosome adaptor) complex RNA-binding subunit Rmn1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541281, updated on 18-Sep-2024

Summary

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Official Symbol
rmn1
Official Full Name
MTREC (exosome adaptor) complex RNA-binding subunit Rmn1
Primary source
PomBase:SPBC902.04
Locus tag
SPOM_SPBC902.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rmn1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (489856..492221)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein phosphatase regulator Nem2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene isocitrate dehydrogenase (NAD+) subunit 2 Neighboring gene ncRNA Neighboring gene gamma tubulin complex linker Mto2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation of a novel rmn1 gene genetically linked to spnab2 with respect to mRNA export in fission yeast. Cho YS, et al. Mol Cells, 2012 Sep. PMID 22936388, Free PMC Article
  2. Chromosome-associated RNA-protein complexes promote pairing of homologous chromosomes during meiosis in Schizosaccharomyces pombe. Ding DQ, et al. Nat Commun, 2019 Dec 6. PMID 31811152, Free PMC Article
  3. Ubiquitination-dependent control of sexual differentiation in fission yeast. Simonetti F, et al. Elife, 2017 Aug 25. PMID 28841135, Free PMC Article
  4. The fission yeast MTREC complex targets CUTs and unspliced pre-mRNAs to the nuclear exosome. Zhou Y, et al. Nat Commun, 2015 May 20. PMID 25989903, Free PMC Article
  5. Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance. Lee NN, et al. Cell, 2013 Nov 21. PMID 24210919, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in nuclear polyadenylation-dependent CUT catabolic process NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
part_of MTREC complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of Mei2 nuclear dot complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nuclear body IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
MTREC (exosome adaptor) complex RNA-binding subunit Rmn1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    489856..492221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021108.3 → NP_595202.1  MTREC (exosome adaptor) complex RNA-binding subunit Rmn1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595202.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9USP9, Q9UU06
    Conserved Domains (3) summary
    cd12257
    Location:241 → 312
    RRM1_RBM26_like; RNA recognition motif 1 in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
    pfam14303
    Location:299 → 432
    NAM-associated; No apical meristem-associated C-terminal domain
    cl02562
    Location:12 → 75
    PWI; PWI domain
Nucleotide Protein
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