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rsn1 Ca(2+) transporter Rsn1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540988, updated on 18-Sep-2024

Summary

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Official Symbol
rsn1
Official Full Name
Ca(2+) transporter Rsn1
Primary source
PomBase:SPBC354.08c
Locus tag
SPOM_SPBC354.08C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rsn1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (561122..564813, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Transferrin receptor-like protease Tre1 Neighboring gene ncRNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  2. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  3. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables calcium ion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables calcium-activated cation channel activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cell division site HDA PubMed 
is_active_in cell tip HDA PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ca(2+) transporter Rsn1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    561122..564813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021138.3 → NP_595232.1  Ca(2+) transporter Rsn1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595232.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43022
    Conserved Domains (4) summary
    COG5594
    Location:1 → 863
    COG5594; Uncharacterized integral membrane protein [Function unknown]
    pfam02714
    Location:320 → 656
    RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate
    pfam13967
    Location:31 → 173
    RSN1_TM; Late exocytosis, associated with Golgi transport
    pfam14703
    Location:233 → 298
    PHM7_cyt; Cytosolic domain of 10TM putative phosphate transporter
Nucleotide Protein
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