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tre1 Transferrin receptor-like protease Tre1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540952, updated on 18-Sep-2024

Summary

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Official Symbol
tre1
Official Full Name
Transferrin receptor-like protease Tre1
Primary source
PomBase:SPBC354.09c
Locus tag
SPOM_SPBC354.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ppp59
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Genomic context

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See tre1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (565094..568389, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ca(2+) transporter Rsn1 Neighboring gene ncRNA Neighboring gene 5S ribosomal RNA Neighboring gene tRNA-Gly

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  2. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article
  3. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  4. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables carboxypeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in fungal-type vacuole membrane IC
Inferred by Curator
more info
  

General protein information

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Preferred Names
Transferrin receptor-like protease Tre1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    565094..568389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021139.3 → NP_595233.1  Transferrin receptor-like protease Tre1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595233.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43023
    Conserved Domains (4) summary
    cd03874
    Location:424 → 644
    M28_PMSA_TfR_like; M28 Zn-peptidase Transferrin Receptor-like family
    pfam04253
    Location:675 → 792
    TFR_dimer; Transferrin receptor-like dimerization domain
    cl10459
    Location:197 → 416
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
    cl14876
    Location:139 → 191
    Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42
Nucleotide Protein
Heading Accession and Version

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