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sec9 protein transport protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540623, updated on 18-Sep-2024

Summary

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Official Symbol
sec9
Official Full Name
protein transport protein
Primary source
PomBase:SPBC26H8.02c
Locus tag
SPOM_SPBC26H8.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See sec9 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3941984..3944037, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene thiazole biosynthetic enzyme Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The fission yeast synaptobrevin ortholog Syb1 plays an important role in forespore membrane formation and spore maturation. Yamaoka T, et al. Eukaryot Cell, 2013 Sep. PMID 23709180, Free PMC Article
  2. The Schizosaccharomyces pombe syntaxin 1 homolog, Psy1, is essential in the development of the forespore membrane. Maeda Y, et al. Biosci Biotechnol Biochem, 2009 Feb. PMID 19202289
  3. A fission yeast SNAP-25 homologue, SpSec9, is essential for cytokinesis and sporulation. Nakamura T, et al. Cell Struct Funct, 2005. PMID 16272747
  4. Endocytosis is essential for dynamic translocation of a syntaxin 1 orthologue during fission yeast meiosis. Kashiwazaki J, et al. Mol Biol Cell, 2011 Oct. PMID 21832151, Free PMC Article
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables SNAP receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables syntaxin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport ISO
Inferred from Sequence Orthology
more info
  
involved_in ascospore-type prospore membrane formation IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in ascospore-type prospore membrane formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in exocytosis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular protein transport NAS
Non-traceable Author Statement
more info
  
involved_in vesicle fusion IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of SNARE complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in prospore membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3941984..3944037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022565.3 → NP_596643.1  protein transport protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596643.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74786
    Conserved Domains (2) summary
    cd15857
    Location:359 → 417
    SNARE_SEC9C; C-terminal SNARE motif of SEC9
    cd15886
    Location:200 → 269
    SNARE_SEC9N; N-terminal SNARE motif of SEC9
Nucleotide Protein
Heading Accession and Version

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