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cog2 COG complex subunit Cog2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540377, updated on 18-Sep-2024

Summary

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Official Symbol
cog2
Official Full Name
COG complex subunit Cog2
Primary source
PomBase:SPBC36.08c
Locus tag
SPOM_SPBC36.08C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See cog2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (853526..858328, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene class 1 histone deacetylase Clr6 Neighboring gene ncRNA Neighboring gene ER farnesyl pyrophosphate synthetase Erg20 Neighboring gene elongator subunit Iki3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U2 snRNP-associated protein sap61

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
  
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport ISO
Inferred from Sequence Orthology
more info
  
involved_in intracellular protein transport NAS
Non-traceable Author Statement
more info
  
involved_in retrograde transport, vesicle recycling within Golgi ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of Golgi transport complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in cytosol HDA PubMed 
is_active_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
COG complex subunit Cog2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    853526..858328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021244.3 → NP_595336.1  COG complex subunit Cog2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595336.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59705
    Conserved Domains (1) summary
    cl19297
    Location:33 → 142
    Dor1; Dor1-like family
Nucleotide Protein
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