U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

thiamine pyrophosphate transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540155, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
thiamine pyrophosphate transporter
Primary source
PomBase:SPBC1604.04
Locus tag
SPOM_SPBC1604.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (3923954..3925500, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene importin alpha family nuclear import signal receptor adaptor Imp1 Neighboring gene F0-ATPase subunit atp4 Neighboring gene Mak21 family protein Neighboring gene ncRNA Neighboring gene glucose-6-phosphate isomerase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene PPR repeat-containing protein Ppr1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables thiamine pyrophosphate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables thiamine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mitochondrial thiamine pyrophosphate transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in thiamine pyrophosphate transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrion HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
thiamine pyrophosphate transporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3923954..3925500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022557.3 → NP_596636.2  thiamine pyrophosphate transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596636.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94370
    Conserved Domains (2) summary
    PTZ00169
    Location:21 → 276
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:192 → 277
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous