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fmd2 glutathione-dependent formaldehyde dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540059, updated on 18-Sep-2024

Summary

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Official Symbol
fmd2
Official Full Name
glutathione-dependent formaldehyde dehydrogenase
Primary source
PomBase:SPBC1198.01
Locus tag
SPOM_SPBC1198.01
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See fmd2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (172627..174315)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene nicotinic acid plasma membrane transporter Neighboring gene transcription factor Cha4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene adenine deaminase Dea2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nitric oxide signaling and its role in oxidative stress response in Schizosaccharomyces pombe. Astuti RI, et al. Nitric Oxide, 2016 Jan 30. PMID 26645666
  2. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cellular detoxification of nitrogen compound IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in cellular response to nitrosative stress IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 

General protein information

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Preferred Names
glutathione-dependent formaldehyde dehydrogenase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    172627..174315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020976.3 → NP_595070.1  glutathione-dependent formaldehyde dehydrogenase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595070.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P6I8
    Conserved Domains (2) summary
    cd08283
    Location:37 → 421
    FDH_like_1; Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1
    COG1063
    Location:37 → 417
    Tdh; Threonine dehydrogenase or related Zn-dependent dehydrogenase [Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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