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zrt1 plasma membrane ZIP zinc transmembrane transporter Zrt1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539655, updated on 14-Nov-2024

Summary

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Official Symbol
zrt1
Official Full Name
plasma membrane ZIP zinc transmembrane transporter Zrt1
Primary source
PomBase:SPBC16D10.06
Locus tag
SPOM_SPBC16D10.06
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See zrt1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3607177..3609330)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene histone deacetylase, Sirtuin family, NAD-dependent Sir2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Response of Schizosaccharomyces pombe to zinc deficiency. Dainty SJ, et al. Eukaryot Cell, 2008 Mar. PMID 18203864, Free PMC Article
  2. Loss of Zhf and the tightly regulated zinc-uptake system SpZrt1 in Schizosaccharomyces pombe reveals the delicacy of cellular zinc balance. Boch A, et al. FEMS Yeast Res, 2008 Sep. PMID 18637840
  3. Zinc transporters belonging to the Cation Diffusion Facilitator (CDF) family have complementary roles in transporting zinc out of the cytosol. Choi S, et al. PLoS Genet, 2018 Mar. PMID 29529046, Free PMC Article
  4. The fission yeast FLCN/FNIP complex augments TORC1 repression or activation in response to amino acid (AA) availability. Calvo IA, et al. iScience, 2021 Nov 19. PMID 34805795, Free PMC Article
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. the tightly regulated Zrt1 (SPBC16D10.06)and Zhf contribute to cellular zinc homeostasis
    Title: Loss of Zhf and the tightly regulated zinc-uptake system SpZrt1 in Schizosaccharomyces pombe reveals the delicacy of cellular zinc balance.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables high-affinity zinc transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables high-affinity zinc transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables zinc ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in intracellular zinc ion homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in zinc ion import across plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in zinc ion import across plasma membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in zinc ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
plasma membrane ZIP zinc transmembrane transporter Zrt1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3607177..3609330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022422.3 → NP_596501.1  plasma membrane ZIP zinc transmembrane transporter Zrt1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596501.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94639
    Conserved Domains (1) summary
    pfam02535
    Location:60 → 405
    Zip; ZIP Zinc transporter
Nucleotide Protein
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