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gma12 Golgi alpha-1,2-galactosyltransferase Gma12 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539101, updated on 18-Sep-2024

Summary

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Official Symbol
gma12
Official Full Name
Golgi alpha-1,2-galactosyltransferase Gma12
Primary source
PomBase:SPCC736.04c
Locus tag
SPOM_SPCC736.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See gma12 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (315827..317852, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phenylalanyl-tRNA synthetase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Localization of an alpha 1,2 galactosyltransferase activity to the Golgi apparatus of Schizosaccharomyces pombe. Chappell TG, et al. Mol Biol Cell, 1994 May. PMID 7522655, Free PMC Article
  2. Differences in in vivo acceptor specificity of two galactosyltransferases, the gmh3+ and gma12+ gene products from Schizosaccharomyces pombe. Yoko-o T, et al. Eur J Biochem, 1998 Nov 1. PMID 9839953
  3. Structural analysis of α1,3-linked galactose-containing oligosaccharides in Schizosaccharomyces pombe mutants harboring single and multiple α-galactosyltransferase genes disruptions. Ohashi T, et al. Glycobiology, 2011 Mar. PMID 21098516
  4. Identification of novel α1,3-galactosyltransferase and elimination of α-galactose-containing glycans by disruption of multiple α-galactosyltransferase genes in Schizosaccharomyces pombe. Ohashi T, et al. J Biol Chem, 2012 Nov 9. PMID 22988247, Free PMC Article
  5. Substrate specificities of α1,2- and α1,3-galactosyltransferases and characterization of Gmh1p and Otg1p in Schizosaccharomyces pombe. Fukunaga T, et al. Glycobiology, 2021 Sep 9. PMID 33909078

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables alpha-1,2-galactosyltransferase activity EXP
Inferred from Experiment
more info
 PubMed 
enables alpha-1,2-galactosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables alpha-1,2-galactosyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein N-linked glycosylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine EXP
Inferred from Experiment
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in protein O-linked glycosylation EXP
Inferred from Experiment
more info
 PubMed 
involved_in protein O-linked glycosylation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in Golgi membrane IDA
Inferred from Direct Assay
more info
 PubMed 
part_of mannan polymerase II complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
Golgi alpha-1,2-galactosyltransferase Gma12

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    315827..317852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022768.3 → NP_587775.1  Golgi alpha-1,2-galactosyltransferase Gma12 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587775.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09174
    Conserved Domains (1) summary
    pfam05637
    Location:100 → 340
    Glyco_transf_34; galactosyl transferase GMA12/MNN10 family
Nucleotide Protein
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