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NGG1 interacting factor 3 family protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539063, updated on 18-Sep-2024

Summary

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Official Full Name
NGG1 interacting factor 3 family protein
Primary source
PomBase:SPCC126.12
Locus tag
SPOM_SPCC126.12
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003421.2 (2138045..2139203)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene rrm type RNA-binding protein Neighboring gene isoamyl acetate hydrolytic enzyme Iah1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Asn Neighboring gene SAP128 family histone deacetylase complex subunit Neighboring gene U5 snRNP-associated protein Prp18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative Genomic Analysis of the DUF34 Protein Family Suggests Role as a Metal Ion Chaperone or Insertase. Reed CJ, et al. Biomolecules, 2021 Aug 27. PMID 34572495, Free PMC Article
  2. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
NOT enables GTP cyclohydrolase activity TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
NGG1 interacting factor 3 family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    2138045..2139203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023446.3 → NP_588455.1  NGG1 interacting factor 3 family protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588455.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94404
    Conserved Domains (1) summary
    pfam01784
    Location:9 → 248
    NIF3; NIF3 (NGG1p interacting factor 3)
Nucleotide Protein
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