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hydrolase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538874, updated on 18-Sep-2024

Summary

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Official Full Name
hydrolase
Primary source
PomBase:SPCC777.06c
Locus tag
SPOM_SPCC777.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (1606351..1607962, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene cysteine desulfurase nifs family protein Neighboring gene ncRNA Neighboring gene amino acid transporter Dip5 Neighboring gene ncRNA Neighboring gene RagC/D GTPase Gtr2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene alpha-1,2-mannosyltransferase Omh3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables hydrolase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
hydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1606351..1607962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023242.3 → NP_588252.1  hydrolase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588252.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74545
    Conserved Domains (2) summary
    COG1235
    Location:3 → 301
    PhnP; Phosphoribosyl 1,2-cyclic phosphodiesterase [Inorganic ion transport and metabolism]
    cd16279
    Location:7 → 234
    metallo-hydrolase-like_MBL-fold; uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo
Nucleotide Protein
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