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mitochondrial ribosomal protein subunit L9 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538814, updated on 18-Sep-2024

Summary

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Official Full Name
mitochondrial ribosomal protein subunit L9
Primary source
PomBase:SPCC777.17c
Locus tag
SPOM_SPCC777.17C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003421.2 (1618146..1619058, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene NEDD8-conjugating enzyme Ubc12 Neighboring gene ER stress response thioredoxin family membrane disulfide oxidoreductase Neighboring gene protein Gta3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene retromer complex subunit Vps35

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables structural constituent of ribosome ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit ISM
Inferred from Sequence Model
more info
  
is_active_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
mitochondrial ribosomal protein subunit L9

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1618146..1619058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023249.3 → NP_588259.1  mitochondrial ribosomal protein subunit L9 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588259.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P801
    Conserved Domains (2) summary
    COG0359
    Location:1 → 101
    RplI; Ribosomal protein L9 [Translation, ribosomal structure and biogenesis]
    pfam01281
    Location:44 → 77
    Ribosomal_L9_N; Ribosomal protein L9, N-terminal domain
Nucleotide Protein
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