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RT1-Cl RT1 class Ib, locus Cl [ Rattus norvegicus (Norway rat) ]

Gene ID: 24977, updated on 27-Nov-2024

Summary

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Official Symbol
RT1-Clprovided by RGD
Official Full Name
RT1 class Ib, locus Clprovided by RGD
Primary source
RGD:3472
See related
AllianceGenome:RGD:3472
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RT1.A
Annotation information
not in current annotation release
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Genomic context

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See RT1-Cl in Genome Data Viewer
Location:
chromosome: 20
Annotation release Status Assembly Chr Location
106 latest, but not current Rn_Celera (GCF_000002265.2) Unplaced Scaffold NW_001088046.1 (300..2207, complement)

Bibliography

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Related articles in PubMed

  1. Dialysis treatment: are patients aware of their options? Tiedke J, et al. Nephrol News Issues, 1992 Nov. PMID 1300430
  2. Sequence analysis of the promoter regions of the classical class I gene RT1.Al and two other class I genes of the rat MHC. Lambracht D, et al. Immunogenetics, 1995. PMID 7759134

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  

General protein information

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Preferred Names
RT1 class Ib, locus Cl
Names
MHC class I antigen
RT1 class Ib gene, RT1-C-region (CI)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_206848.1 → NP_996730.1  RT1 class Ib, locus Cl precursor

    See identical proteins and their annotated locations for NP_996730.1

    Status: PROVISIONAL

    Source sequence(s)
    AF025308
    UniProtKB/TrEMBL
    O19445, Q08680
    Conserved Domains (3) summary
    cd07698
    Location:204 → 296
    IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
    pfam00129
    Location:22 → 200
    MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
    pfam06623
    Location:340 → 367
    MHC_I_C; MHC_I C-terminus
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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