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Prp15 proline-rich protein 15 [ Rattus norvegicus (Norway rat) ]

Gene ID: 24687, updated on 4-Jan-2025

Summary

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Official Symbol
Prp15provided by RGD
Official Full Name
proline-rich protein 15provided by RGD
Primary source
RGD:3413
See related
EnsemblRapid:ENSRNOG00000070768 AllianceGenome:RGD:3413
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Prp; Prpb; Rp13; RATRP13
Summary
Predicted to be located in extracellular region. Orthologous to human PRH2 (proline rich protein HaeIII subfamily 2). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Thymus (RPKM 4.3), Kidney (RPKM 0.4) and 1 other tissue See more
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Genomic context

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See Prp15 in Genome Data Viewer
Location:
4q42
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (167559867..167563414, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (165828456..165832004, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (166222418..166293492)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene acidic proline-rich protein PRP25-like Neighboring gene acidic proline-rich protein 25 Neighboring gene proline-rich protein 2-like Neighboring gene peptidylglycine alpha-amidating monooxygenase, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. A 13-amino acid n-terminal domain of a basic proline-rich protein is necessary for storage in secretory granules and facilitates exit from the endoplasmic reticulum. Castle AM, et al. J Biol Chem, 1992 Jun 25. PMID 1618808
  2. Molecular characterization of rat multigene family encoding proline-rich proteins. Lin HH, et al. Genomics, 1991 May. PMID 2045095

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
proline-rich protein 15
Names
Proline-rich protein salivary
proline-rich protein, salivary

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012632.2 → NP_036764.1  proline-rich protein 15 precursor

    See identical proteins and their annotated locations for NP_036764.1

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000004
    UniProtKB/TrEMBL
    A6IMA8, F1LV68, F7F912, Q04105
    Related
    ENSRNOP00000048827.3, ENSRNOT00000045884.4

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    167559867..167563414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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