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HSPC300 Haematopoietic stem/progenitor cell protein 300 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 246497, updated on 9-Dec-2024

Summary

Official Symbol
HSPC300provided by FlyBase
Official Full Name
Haematopoietic stem/progenitor cell protein 300provided by FlyBase
Primary source
FLYBASE:FBgn0061198
Locus tag
Dmel_CG30173
See related
AllianceGenome:FB:FBgn0061198
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Brk1; CG30173; dHSPC; dHSPC300; Dmel\CG30173; SIP1
Summary
Involved in several processes, including central nervous system morphogenesis; positive regulation of plasma membrane bounded cell projection assembly; and regulation of synaptic assembly at neuromuscular junction. Part of SCAR complex. Is expressed in larval central nervous system; larval longitudinal connective; organism; ovary; and symmetrical commissure. Orthologous to human BRK1 (BRICK1 subunit of SCAR/WAVE actin nucleating complex). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See HSPC300 in Genome Data Viewer
Location:
60B4-60B4; 2-106 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24027717..24028789, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19915240..19916312, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45350 Neighboring gene Adenylate kinase 2 Neighboring gene Ejaculatory bulb protein III Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Chip

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of SCAR complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of SCAR complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of SCAR complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
haematopoietic stem/progenitor cell protein 300
Names
CG30173-PA
CG30173-PB
HSPC300-PA
HSPC300-PB
syntaxin interacting protein 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    24027717..24028789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299881.1NP_001286810.1  haematopoietic stem/progenitor cell protein 300, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286810.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D5A7K1, Q8MLQ0
    Conserved Domains (1) summary
    pfam10152
    Location:3467
    CCDC53; Subunit CCDC53 of WASH complex
  2. NM_166648.3NP_726400.1  haematopoietic stem/progenitor cell protein 300, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726400.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D5A7K1, Q8MLQ0
    Related
    FBpp0072103
    Conserved Domains (1) summary
    pfam10152
    Location:3467
    CCDC53; Subunit CCDC53 of WASH complex