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Tgif2lx1 TGFB-induced factor homeobox 2-like, X-linked 1 [ Mus musculus (house mouse) ]

Gene ID: 245583, updated on 4-Jan-2025

Summary

Official Symbol
Tgif2lx1provided by MGI
Official Full Name
TGFB-induced factor homeobox 2-like, X-linked 1provided by MGI
Primary source
MGI:MGI:2387796
See related
Ensembl:ENSMUSG00000100133 AllianceGenome:MGI:2387796
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tex1; Tgifx1; Tgif2lx
Summary
Predicted to enable sequence-specific double-stranded DNA binding activity. Is expressed in genitourinary system. Orthologous to several human genes including TGIF2LX (TGFB induced factor homeobox 2 like X-linked). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See Tgif2lx1 in Genome Data Viewer
Location:
X E1; X 49.58 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (117389405..117390426, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (118479708..118480729, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14910 Neighboring gene TGFB-induced factor homeobox 2-like, X-linked 2 Neighboring gene STARR-seq mESC enhancer starr_47838 Neighboring gene STARR-seq mESC enhancer starr_47839 Neighboring gene STARR-seq mESC enhancer starr_47840 Neighboring gene aldolase A, fructose-bisphosphate pseudogene Neighboring gene STARR-seq mESC enhancer starr_47841 Neighboring gene STARR-seq mESC enhancer starr_47842 Neighboring gene STARR-seq mESC enhancer starr_47843 Neighboring gene STARR-seq mESC enhancer starr_47844 Neighboring gene STARR-seq mESC enhancer starr_47845 Neighboring gene STARR-seq mESC enhancer starr_47846 Neighboring gene STARR-seq mESC enhancer starr_47847 Neighboring gene STARR-seq mESC enhancer starr_47848 Neighboring gene ubiquitin-conjugating enzyme E2 C-like

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
TGFB-induced factor homeobox 2-like, X-linked 1
Names
TGF beta-induced transcription factor 2-like protein
TGIF homeobox 1
testis expressed homeobox Tex1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153109.1NP_694749.1  TGFB-induced factor homeobox 2-like, X-linked 1

    See identical proteins and their annotated locations for NP_694749.1

    Status: PROVISIONAL

    Source sequence(s)
    AF434662
    Consensus CDS
    CCDS30368.1
    UniProtKB/TrEMBL
    Q2NKH6, Q8K5B9
    Related
    ENSMUSP00000073522.5, ENSMUST00000073857.6
    Conserved Domains (1) summary
    pfam05920
    Location:5694
    Homeobox_KN; Homeobox KN domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    117389405..117390426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)