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Gm4988 predicted gene 4988 [ Mus musculus (house mouse) ]

Gene ID: 245440, updated on 27-Nov-2024

Summary

Official Symbol
Gm4988provided by MGI
Official Full Name
predicted gene 4988provided by MGI
Primary source
MGI:MGI:3647289
See related
Ensembl:ENSMUSG00000121394 AllianceGenome:MGI:3647289
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG245440
Expression
Biased expression in genital fat pad adult (RPKM 5.5), placenta adult (RPKM 4.5) and 5 other tissues See more
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Genomic context

See Gm4988 in Genome Data Viewer
Location:
X A6; X 34.42 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (60331800..60336086)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (61288194..61292480)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene estrogen related receptor, beta pseudogene Neighboring gene cerebellar degeneration related antigen 1, opposite strand Neighboring gene cerebellar degeneration related antigen 1 Neighboring gene STARR-seq mESC enhancer starr_47247 Neighboring gene STARR-seq mESC enhancer starr_47248 Neighboring gene NudC domain containing 2 pseudogene Neighboring gene 40S ribosomal protein SA pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC245440

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001362886.1NP_001349815.1  uncharacterized protein LOC245440

    Status: VALIDATED

    Source sequence(s)
    BX682230
    Related
    ENSMUST00000232598.2
    Conserved Domains (1) summary
    pfam01454
    Location:244399
    MAGE; MAGE family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    60331800..60336086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)