U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

oxy-5 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 24104659, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
oxy-5
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00045483
Locus tag
CELE_F56H1.7
See related
AllianceGenome:WB:WBGene00045483
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in 2-oxoglutarate metabolic process. Predicted to be located in mitochondrion. Predicted to be part of oxoglutarate dehydrogenase complex. Is expressed in chemosensory neurons; head neurons; intestine; pharynx; and tail neurons. [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See oxy-5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (5760896..5762435, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene SSD domain-containing protein Neighboring gene Cytosolic carboxypeptidase 1 Neighboring gene Palmitoyltransferase Neighboring gene LRRCT domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Nucleic acid therapy for lifespan prolongation: present and future. Lai WF. J Biosci, 2011 Sep. PMID 21857119
  2. Gene regulatory network inference in long-lived C. elegans reveals modular properties that are predictive of novel aging genes. Suriyalaksh M, et al. iScience, 2022 Jan 21. PMID 35036864, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in 2-oxoglutarate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in 2-oxoglutarate metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
part_of oxoglutarate dehydrogenase complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Uncharacterized protein
NP_001293404.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    5760896..5762435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001306475.2 → NP_001293404.1  Uncharacterized protein CELE_F56H1.7 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293404.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A7DT45
    Conserved Domains (1) summary
    pfam10937
    Location:75 → 157
    DUF2638; Protein of unknown function (DUF2638)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.