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Luzp2 leucine zipper protein 2 [ Mus musculus (house mouse) ]

Gene ID: 233271, updated on 27-Nov-2024

Summary

Official Symbol
Luzp2provided by MGI
Official Full Name
leucine zipper protein 2provided by MGI
Primary source
MGI:MGI:1889615
See related
Ensembl:ENSMUSG00000063297 AllianceGenome:MGI:1889615
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D130073E01; 9330154K17Rik
Summary
Predicted to be located in extracellular region. Is expressed in diencephalon lateral wall ventricular layer; midbrain ventricular layer; pons marginal layer; and pons ventricular layer. Orthologous to human LUZP2 (leucine zipper protein 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in frontal lobe adult (RPKM 21.2), cortex adult (RPKM 13.6) and 4 other tissues See more
Orthologs
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Genomic context

See Luzp2 in Genome Data Viewer
Location:
7 B5; 7 33.23 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (54484936..54918636)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (54835245..55268888)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Mrps33 pseudogene Neighboring gene predicted gene 6290 Neighboring gene STARR-seq mESC enhancer starr_18947 Neighboring gene STARR-seq mESC enhancer starr_18948 Neighboring gene nucleolin pseudogene Neighboring gene predicted gene, 24116 Neighboring gene STARR-seq mESC enhancer starr_18949 Neighboring gene STARR-seq mESC enhancer starr_18950 Neighboring gene STARR-seq mESC enhancer starr_18951 Neighboring gene STARR-seq mESC enhancer starr_18952 Neighboring gene ribosomal protein S7 pseudogene Neighboring gene STARR-seq mESC enhancer starr_18954 Neighboring gene predicted gene, 26482

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (1)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
leucine zipper protein 2
Names
leucine zipper motif 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178705.5NP_848820.4  leucine zipper protein 2 precursor

    See identical proteins and their annotated locations for NP_848820.4

    Status: VALIDATED

    Source sequence(s)
    AC102117, AC116953, BC075646
    Consensus CDS
    CCDS39970.1
    UniProtKB/Swiss-Prot
    Q7TPB5, Q8BGY3, Q8CBZ7
    Related
    ENSMUSP00000080979.7, ENSMUST00000082373.8
    Conserved Domains (1) summary
    COG1196
    Location:21208
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    54484936..54918636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540826.5XP_006540889.1  leucine zipper protein 2 isoform X1

    Conserved Domains (1) summary
    pfam05622
    Location:5128
    HOOK; HOOK protein