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Gm4871 predicted gene 4871 [ Mus musculus (house mouse) ]

Gene ID: 231885, updated on 27-Nov-2024

Summary

Official Symbol
Gm4871provided by MGI
Official Full Name
predicted gene 4871provided by MGI
Primary source
MGI:MGI:3648713
See related
Ensembl:ENSMUSG00000061707 AllianceGenome:MGI:3648713
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG231885
Expression
Restricted expression toward testis adult (RPKM 72.5) See more
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Genomic context

See Gm4871 in Genome Data Viewer
Location:
5 G2; 5 84.95 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (144966410..144969574, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (145029600..145032764, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene SMAD specific E3 ubiquitin protein ligase 1 Neighboring gene predicted gene, 33821 Neighboring gene STARR-positive B cell enhancer ABC_E10365 Neighboring gene karyopherin subunit alpha 7 Neighboring gene predicted gene, 33904 Neighboring gene RIKEN cDNA 1700018F24 gene Neighboring gene STARR-seq mESC enhancer starr_14822 Neighboring gene actin related protein 2/3 complex, subunit 1A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC231885

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101463.1NP_001094933.1  uncharacterized protein LOC231885

    See identical proteins and their annotated locations for NP_001094933.1

    Status: PREDICTED

    Source sequence(s)
    AC113295
    Consensus CDS
    CCDS51695.1
    UniProtKB/TrEMBL
    D3Z0W7, Q9DA78
    Related
    ENSMUSP00000071368.5, ENSMUST00000071421.6
    Conserved Domains (1) summary
    cd06224
    Location:63176
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    144966410..144969574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)