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AOL_s00004g98 hypothetical protein [ Orbilia oligospora ATCC 24927 ]

Gene ID: 22888595, updated on 18-Sep-2024

Summary

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Gene symbol
AOL_s00004g98
Gene description
hypothetical protein
Locus tag
AOL_s00004g98
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Orbilia oligospora ATCC 24927 (strain: ATCC 24927, culture-collection: ATCC:24927)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; Orbilia; Orbilia oligospora
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Genomic context

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See AOL_s00004g98 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_011645561.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011645561.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables squalene synthase [NAD(P)H] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ergosterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in farnesyl diphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_011117050.1
  • AOL_s00004g98 gene product from transcript AOL_s00004g98r

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011645561.1 Reference assembly

    Range
    320067..321829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011118748.1 → XP_011117050.1  hypothetical protein AOL_s00004g98 [Orbilia oligospora ATCC 24927]

    See identical proteins and their annotated locations for XP_011117050.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7C8RE35, G1WXT8
    Conserved Domains (1) summary
    cl00210
    Location:40 → 379
    Isoprenoid_Biosyn_C1; Isoprenoid Biosynthesis enzymes, Class 1
Nucleotide Protein
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