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Thrsp thyroid hormone responsive [ Mus musculus (house mouse) ]

Gene ID: 21835, updated on 27-Nov-2024

Summary

Official Symbol
Thrspprovided by MGI
Official Full Name
thyroid hormone responsiveprovided by MGI
Primary source
MGI:MGI:109126
See related
Ensembl:ENSMUSG00000035686 AllianceGenome:MGI:109126
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
S14; SPOT14
Summary
Enables molecular function inhibitor activity and protein homodimerization activity. Involved in regulation of triglyceride biosynthetic process. Acts upstream of or within response to bacterium. Located in cytosol. Is expressed in several structures, including alimentary system; heart; nervous system; respiratory system; and sensory organ. Used to study attention deficit hyperactivity disorder. Orthologous to human THRSP (thyroid hormone responsive). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in subcutaneous fat pad adult (RPKM 923.9), mammary gland adult (RPKM 720.3) and 6 other tissues See more
Orthologs
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Genomic context

See Thrsp in Genome Data Viewer
Location:
7 E1; 7 53.49 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (97062140..97066757, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (97412933..97417550, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9293 Neighboring gene ALG8 alpha-1,3-glucosyltransferase Neighboring gene NADH:ubiquinone oxidoreductase subunit C2 Neighboring gene STARR-seq mESC enhancer starr_19594 Neighboring gene predicted gene, 32945 Neighboring gene STARR-seq mESC enhancer starr_19596 Neighboring gene potassium channel tetramerisation domain containing 14

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables molecular function inhibitor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein homodimerization activity IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
thyroid hormone-inducible hepatic protein
Names
spot 14 protein
thyroid hormone responsive SPOT14 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009381.3NP_033407.1  thyroid hormone-inducible hepatic protein

    See identical proteins and their annotated locations for NP_033407.1

    Status: VALIDATED

    Source sequence(s)
    AC172193, AI117155, AK077300, BY238050
    Consensus CDS
    CCDS21458.1
    UniProtKB/Swiss-Prot
    Q62264
    UniProtKB/TrEMBL
    Q543J4
    Related
    ENSMUSP00000042988.8, ENSMUST00000043077.8
    Conserved Domains (1) summary
    pfam07084
    Location:2147
    Spot_14; Thyroid hormone-inducible hepatic protein Spot 14

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    97062140..97066757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)