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Pth2r parathyroid hormone 2 receptor [ Mus musculus (house mouse) ]

Gene ID: 213527, updated on 27-Nov-2024

Summary

Official Symbol
Pth2rprovided by MGI
Official Full Name
parathyroid hormone 2 receptorprovided by MGI
Primary source
MGI:MGI:2180917
See related
Ensembl:ENSMUSG00000025946 AllianceGenome:MGI:2180917
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Pthr2
Summary
Predicted to enable G protein-coupled peptide receptor activity; parathyroid hormone receptor activity; and peptide hormone binding activity. Involved in positive regulation of cold-induced thermogenesis. Predicted to be active in plasma membrane. Orthologous to human PTH2R (parathyroid hormone 2 receptor). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
NEW
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Try the new Transcript table

Genomic context

See Pth2r in Genome Data Viewer
Location:
1 C3; 1 33.05 cM
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (65317921..65428784)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (65280282..65389625)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:65224921-65225030 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:65225772-65225881 Neighboring gene STARR-positive B cell enhancer ABC_E5765 Neighboring gene isocitrate dehydrogenase 1 (NADP+), soluble Neighboring gene phosphoinositide kinase, FYVE type zinc finger containing Neighboring gene STARR-positive B cell enhancer ABC_E5766 Neighboring gene STARR-seq mESC enhancer starr_01177 Neighboring gene STARR-seq mESC enhancer starr_01178 Neighboring gene STARR-seq mESC enhancer starr_01179 Neighboring gene predicted gene 28926 Neighboring gene predicted gene 28923

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (3)  1 citation

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables parathyroid hormone receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables parathyroid hormone receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables peptide hormone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
parathyroid hormone 2 receptor
Names
PTH2 receptor
parathyroid hormone receptor 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_139270.2NP_644676.1  parathyroid hormone 2 receptor precursor

    See identical proteins and their annotated locations for NP_644676.1

    Status: PROVISIONAL

    Source sequence(s)
    AK045576
    Consensus CDS
    CCDS15017.1
    UniProtKB/Swiss-Prot
    Q91V95
    Related
    ENSMUSP00000027083.7, ENSMUST00000027083.7
    Conserved Domains (2) summary
    pfam00002
    Location:139406
    7tm_2; 7 transmembrane receptor (Secretin family)
    pfam02793
    Location:63125
    HRM; Hormone receptor domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    65317921..65428784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011238473.2XP_011236775.1  parathyroid hormone 2 receptor isoform X1

    Conserved Domains (3) summary
    cd14964
    Location:136161
    7tm_GPCRs; TM helix 1 [structural motif]
    pfam02793
    Location:58120
    HRM; Hormone receptor domain
    cl28897
    Location:134422
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  2. XM_011238474.4XP_011236776.1  parathyroid hormone 2 receptor isoform X2

    See identical proteins and their annotated locations for XP_011236776.1

    Conserved Domains (3) summary
    cd14964
    Location:100125
    7tm_GPCRs; TM helix 1 [structural motif]
    pfam02793
    Location:2284
    HRM; Hormone receptor domain
    cl28897
    Location:98386
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  3. XM_017319688.2XP_017175177.1  parathyroid hormone 2 receptor isoform X5

    Conserved Domains (3) summary
    cd14964
    Location:141166
    7tm_GPCRs; TM helix 1 [structural motif]
    pfam02793
    Location:63125
    HRM; Hormone receptor domain
    cl28897
    Location:139324
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  4. XM_006495842.2XP_006495905.1  parathyroid hormone 2 receptor isoform X2

    See identical proteins and their annotated locations for XP_006495905.1

    Conserved Domains (3) summary
    cd14964
    Location:100125
    7tm_GPCRs; TM helix 1 [structural motif]
    pfam02793
    Location:2284
    HRM; Hormone receptor domain
    cl28897
    Location:98386
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  5. XM_017319687.1XP_017175176.1  parathyroid hormone 2 receptor isoform X3

    Conserved Domains (3) summary
    cd14964
    Location:86111
    7tm_GPCRs; TM helix 1 [structural motif]
    pfam02793
    Location:870
    HRM; Hormone receptor domain
    cl28897
    Location:84372
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  6. XM_006495843.4XP_006495906.1  parathyroid hormone 2 receptor isoform X4

    Conserved Domains (3) summary
    cd14964
    Location:6186
    7tm_GPCRs; TM helix 1 [structural motif]
    pfam02793
    Location:145
    HRM; Hormone receptor domain
    cl28897
    Location:59347
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily