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Tmem212 transmembrane protein 212 [ Mus musculus (house mouse) ]

Gene ID: 208613, updated on 27-Nov-2024

Summary

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Official Symbol
Tmem212provided by MGI
Official Full Name
transmembrane protein 212provided by MGI
Primary source
MGI:MGI:2685410
See related
Ensembl:ENSMUSG00000043164 AllianceGenome:MGI:2685410
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm564; E030011K20Rik
Summary
Predicted to be located in membrane. Is expressed in lung epithelium and nasal cavity respiratory epithelium. Orthologous to human TMEM212 (transmembrane protein 212). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in lung adult (RPKM 27.9), ovary adult (RPKM 26.2) and 1 other tissue See more
Orthologs
human all
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Genomic context

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See Tmem212 in Genome Data Viewer
Location:
3 A3; 3 11.05 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (27920214..27950540, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (27866065..27896391, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 3B Neighboring gene microRNA 3092 Neighboring gene STARR-seq mESC enhancer starr_07240 Neighboring gene STARR-seq mESC enhancer starr_07245 Neighboring gene STARR-seq mESC enhancer starr_07248 Neighboring gene predicted gene, 42194 Neighboring gene predicted gene, 32795 Neighboring gene STARR-seq mESC enhancer starr_07250 Neighboring gene STARR-seq mESC enhancer starr_07251 Neighboring gene predicted gene, 26040 Neighboring gene predicted gene, 42195 Neighboring gene predicted gene, 57707

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Identification of FOXJ1 effectors during ciliogenesis in the foetal respiratory epithelium and embryonic left-right organiser of the mouse. Stauber M, et al. Dev Biol, 2017 Mar 15. PMID 27914912
  2. Genetic determinants of micronucleus formation in vivo. Adams DJ, et al. Nature, 2024 Mar. PMID 38355793, Free PMC Article
  3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 212

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164437.1 → NP_001157909.1  transmembrane protein 212

    See identical proteins and their annotated locations for NP_001157909.1

    Status: VALIDATED

    Source sequence(s)
    BC119391, BE980542
    Consensus CDS
    CCDS50876.1
    UniProtKB/Swiss-Prot
    Q0VE21, Q8C6V3
    Related
    ENSMUSP00000049832.4, ENSMUST00000058077.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    27920214..27950540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006535431.1 → XP_006535494.1  transmembrane protein 212 isoform X1

  2. XM_030252517.1 → XP_030108377.1  transmembrane protein 212 isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8C6V3.2 GenPept UniProtKB/Swiss-Prot:Q8C6V3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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