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Cyp4f17 cytochrome P450, family 4, subfamily f, polypeptide 17 [ Mus musculus (house mouse) ]

Gene ID: 208285, updated on 27-Nov-2024

Summary

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Official Symbol
Cyp4f17provided by MGI
Official Full Name
cytochrome P450, family 4, subfamily f, polypeptide 17provided by MGI
Primary source
MGI:MGI:3646233
See related
Ensembl:ENSMUSG00000091586 AllianceGenome:MGI:3646233
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG208285
Expression
Ubiquitous expression in subcutaneous fat pad adult (RPKM 8.0), ovary adult (RPKM 6.3) and 26 other tissues See more
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Genomic context

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See Cyp4f17 in Genome Data Viewer
Location:
17 B1; 17 17.59 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (32725404..32749132)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (32506192..32530158)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41569 Neighboring gene peptidoglycan recognition protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:32561046-32561233 Neighboring gene cytochrome P450, family 4, subfamily f, polypeptide 39 Neighboring gene STARR-seq mESC enhancer starr_42380 Neighboring gene STARR-seq mESC enhancer starr_42381 Neighboring gene STARR-seq mESC enhancer starr_42382 Neighboring gene STARR-seq mESC enhancer starr_42383 Neighboring gene STARR-positive B cell enhancer ABC_E8998 Neighboring gene STARR-seq mESC enhancer starr_42384 Neighboring gene cytochrome P450, family 4, subfamily f, polypeptide 16 Neighboring gene STARR-seq mESC enhancer starr_42386 Neighboring gene predicted gene, 41570

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
cytochrome P450, family 4, subfamily f, polypeptide 17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101445.2 → NP_001094915.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform 1 precursor

    See identical proteins and their annotated locations for NP_001094915.1

    Status: VALIDATED

    Source sequence(s)
    CT485616
    Consensus CDS
    CCDS50059.1
    UniProtKB/TrEMBL
    G3UW78
    Related
    ENSMUSP00000129514.2, ENSMUST00000165999.2
    Conserved Domains (1) summary
    pfam00067
    Location:52 → 515
    p450; Cytochrome P450

  2. NM_001410355.1 → NP_001397284.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    CT485616

  3. NM_001410356.1 → NP_001397285.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    CT485616

  4. NM_001410357.1 → NP_001397286.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform 4

    Status: VALIDATED

    Source sequence(s)
    CT485616

  5. NM_001410358.1 → NP_001397287.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform 5 precursor

    Status: VALIDATED

    Source sequence(s)
    CT485616

  6. NM_001410359.1 → NP_001397288.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform 6 precursor

    Status: VALIDATED

    Source sequence(s)
    CT485616

  7. NM_001410360.1 → NP_001397289.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    CT485616

RNA

  1. NR_177062.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CT485616

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    32725404..32749132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011246339.2 → XP_011244641.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform X6

    Conserved Domains (1) summary
    pfam00067
    Location:3 → 394
    p450; Cytochrome P450

  2. XM_006523959.4 → XP_006524022.1  cytochrome P450, family 4, subfamily f, polypeptide 17 isoform X1

    See identical proteins and their annotated locations for XP_006524022.1

    UniProtKB/TrEMBL
    G3UW78
    Conserved Domains (1) summary
    pfam00067
    Location:52 → 515
    p450; Cytochrome P450
Nucleotide Protein Strain
Heading Accession and Version

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