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HMPREF1120_06198 uncharacterized protein [ Exophiala dermatitidis NIH/UT8656 ]

Gene ID: 20310837, updated on 10-Oct-2024

Summary

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Gene symbol
HMPREF1120_06198
Gene description
uncharacterized protein
Locus tag
HMPREF1120_06198
See related
FungiDB:HMPREF1120_06198; VEuPathDB:HMPREF1120_06198
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Exophiala dermatitidis NIH/UT8656 (strain: NIH/UT8656)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala
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Genomic context

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See HMPREF1120_06198 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_008751650.1Genomic Context describing neighboring genes Neighboring gene pyrroline-5-carboxylate reductase Neighboring gene 50S ribosomal protein L7/L12 Neighboring gene uncharacterized protein Neighboring gene pyruvate dehydrogenase E1 component subunit alpha, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008751650.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008751650.1 Reference assembly

    Range
    1720011..1721185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009160399.1 → XP_009158647.1  uncharacterized protein HMPREF1120_06198 [Exophiala dermatitidis NIH/UT8656]

    See identical proteins and their annotated locations for XP_009158647.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAN6IUV6, H6C3H1
    Conserved Domains (1) summary
    pfam07052
    Location:111 → 213
    Hep_59; Hepatocellular carcinoma-associated antigen 59
Nucleotide Protein
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