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HELRODRAFT_95885 hypothetical protein [ Helobdella robusta ]

Gene ID: 20217633, updated on 28-Dec-2023

Summary

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Gene symbol
HELRODRAFT_95885
Gene description
hypothetical protein
Locus tag
HELRODRAFT_95885
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Helobdella robusta
Lineage
Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
20

NW_008705398.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008705398.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into bilaterian evolution from three spiralian genomes. Simakov O, et al. Nature, 2013 Jan 24. PMID 23254933, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008705398.1 Reference assembly

    Range
    300335..309558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009030660.1 → XP_009028908.1  hypothetical protein HELRODRAFT_95885 [Helobdella robusta]

    See identical proteins and their annotated locations for XP_009028908.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    T1G986
    Conserved Domains (3) summary
    pfam12937
    Location:154 → 199
    F-box-like; F-box-like
    pfam13229
    Location:708 → 861
    Beta_helix; Right handed beta helix region
    cl19744
    Location:882 → 935
    zf-UBR; Putative zinc finger in N-recognin (UBR box)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases