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lncRNA:CR45622 long non-coding RNA:CR45622 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 19836159, updated on 9-Dec-2024

Summary

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Official Symbol
lncRNA:CR45622provided by FlyBase
Official Full Name
long non-coding RNA:CR45622provided by FlyBase
Primary source
FLYBASE:FBgn0267182
Locus tag
Dmel_CR45622
See related
AllianceGenome:FB:FBgn0267182
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR45622; Dmel\CR45622
Summary
Is expressed in testis. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See lncRNA:CR45622 in Genome Data Viewer
Location:
17A3-17A3; 1-60 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (18227476..18228449, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (18121509..18122482, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Holes in muscle Neighboring gene long non-coding RNA:CR45607 Neighboring gene unpaired 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of Drosophila melanogaster testis transcriptome. Vedelek V, et al. BMC Genomics, 2018 Sep 24. PMID 30249207, Free PMC Article
  2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR45622-RA; Dmel\lncRNA:CR45622-RA; CR45622-RA; Dmel\CR45622-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    18227476..18228449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_123938.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.