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lncRNA:CR43199 long non-coding RNA:CR43199 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 19835479, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR43199provided by FlyBase
Official Full Name
long non-coding RNA:CR43199provided by FlyBase
Primary source
FLYBASE:FBgn0262828
Locus tag
Dmel_CR43199
See related
AllianceGenome:FB:FBgn0262828
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG43199; CR43199; Dmel\CR43199; noncoding_22394
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Genomic context

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See lncRNA:CR43199 in Genome Data Viewer
Location:
7B2-7B2; 1-20 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (7450383..7452199)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (7344416..7346232)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45533 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR43199-RB; Dmel\lncRNA:CR43199-RB; CR43199-RB; Dmel\CR43199-RB
  • lncRNA:CR43199-RC; Dmel\lncRNA:CR43199-RC; CR43199-RC; Dmel\CR43199-RC

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    7450383..7452199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_123822.1 RNA Sequence

    Status: REVIEWED

  2. NR_123823.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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