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lncRNA:CR44178 long non-coding RNA:CR44178 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 19835357, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR44178provided by FlyBase
Official Full Name
long non-coding RNA:CR44178provided by FlyBase
Primary source
FLYBASE:FBgn0265067
Locus tag
Dmel_CR44178
See related
AllianceGenome:FB:FBgn0265067
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG44178; CR44178; Dmel\CR44178
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Genomic context

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See lncRNA:CR44178 in Genome Data Viewer
Location:
93B11-93B11; 3-70 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21088792..21095744)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16914514..16921466)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene doublesex-Mab related 93B Neighboring gene Hematopoietically expressed homeobox Neighboring gene Rho GTPase activating protein at 93B Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46045 Neighboring gene TBC1 domain family member 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characteristics and expression of lncRNA and transposable elements in Drosophila aneuploidy. Zhang S, et al. iScience, 2023 Dec 15. PMID 38125016, Free PMC Article
  2. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR44178-RD; Dmel\lncRNA:CR44178-RD; CR44178-RD; Dmel\CR44178-RD
  • lncRNA:CR44178-RE; Dmel\lncRNA:CR44178-RE; CR44178-RE; Dmel\CR44178-RE
  • lncRNA:CR44178-RF; Dmel\lncRNA:CR44178-RF; CR44178-RF; Dmel\CR44178-RF

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    21088792..21095744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_125218.1 RNA Sequence

    Status: REVIEWED

  2. NR_125220.1 RNA Sequence

    Status: REVIEWED

  3. NR_125219.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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