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lncRNA:CR44801 long non-coding RNA:CR44801 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 19834880, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR44801provided by FlyBase
Official Full Name
long non-coding RNA:CR44801provided by FlyBase
Primary source
FLYBASE:FBgn0266036
Locus tag
Dmel_CR44801
See related
AllianceGenome:FB:FBgn0266036
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR44801; Dmel\CR44801; lincRNA.6
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Genomic context

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See lncRNA:CR44801 in Genome Data Viewer
Location:
21E3-21E3; 2-1.5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (987807..991300, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (987899..991300, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Glutamate receptor IIC Neighboring gene Transmembrane O-mannosyltransferase targeting cadherins 2 Neighboring gene antisense RNA:CR46486 Neighboring gene IA-2 protein tyrosine phosphatase Neighboring gene uncharacterized protein Neighboring gene germinal nascent polypeptide-associated complex alpha subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR44801-RA; Dmel\lncRNA:CR44801-RA; CR44801-RA; Dmel\CR44801-RA
  • lncRNA:CR44801-RB; Dmel\lncRNA:CR44801-RB; CR44801-RB; Dmel\CR44801-RB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    987807..991300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_144655.1 RNA Sequence

    Status: REVIEWED

  2. NR_144656.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.