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srg-1 Serpentine receptor class gamma-1 [ Caenorhabditis elegans ]

Gene ID: 191828, updated on 2-Nov-2024

Summary

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Official Symbol
srg-1
Official Full Name
Serpentine receptor class gamma-1
Primary source
WormBase:WBGene00005159
Locus tag
CELE_C18F10.4
See related
AllianceGenome:WB:WBGene00005159
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srg-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (6256948..6258362, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene putative imidazolonepropionase Neighboring gene Serpentine receptor class gamma-8 Neighboring gene Serpentine receptor class gamma-9 Neighboring gene ncRNA Neighboring gene Serpentine receptor class gamma-2 Neighboring gene Serpentine receptor class gamma-4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved transcription motif suggesting functional parallels between Caenorhabditis elegans SKN-1 and Cap'n'Collar-related basic leucine zipper proteins. Walker AK, et al. J Biol Chem, 2000 Jul 21. PMID 10764775
  2. skn-1, a maternally expressed gene required to specify the fate of ventral blastomeres in the early C. elegans embryo. Bowerman B, et al. Cell, 1992 Mar 20. PMID 1547503
  3. Divergent seven transmembrane receptors are candidate chemosensory receptors in C. elegans. Troemel ER, et al. Cell, 1995 Oct 20. PMID 7585938
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine receptor class gamma-1
NP_498366.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6256948..6258362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065965.3 → NP_498366.2  Serpentine receptor class gamma-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498366.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P46570
    Conserved Domains (1) summary
    pfam02118
    Location:26 → 288
    Srg; Srg family chemoreceptor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P46570.2

Gene LinkOut

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