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ncx-5 Sodium/calcium exchanger membrane region domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 191715, updated on 4-Jan-2025

Summary

Official Symbol
ncx-5
Official Full Name
Sodium/calcium exchanger membrane region domain-containing protein
Primary source
WormBase:WBGene00003570
Locus tag
CELE_Y32F6B.2
See related
AllianceGenome:WB:WBGene00003570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable calcium channel activity and calcium, potassium:sodium antiporter activity. Predicted to be involved in calcium ion transmembrane transport and intracellular calcium ion homeostasis. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in oxygen sensory neurons. Human ortholog(s) of this gene implicated in congenital stationary night blindness 1D. Orthologous to human SLC24A1 (solute carrier family 24 member 1) and SLC24A2 (solute carrier family 24 member 2). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See ncx-5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
10
Sequence:
Chromosome: V; NC_003283.11 (10486361..10490098, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Cdc-42 Related Protein Neighboring gene ncRNA Neighboring gene Solute carrier organic anion transporter family member Neighboring gene ncRNA Neighboring gene AQuaPorin or aquaglyceroporin related

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 
enables calcium channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calcium, potassium:sodium antiporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular calcium ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Sodium/calcium exchanger membrane region domain-containing protein
NP_505690.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    10486361..10490098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073289.4NP_505690.2  Sodium/calcium exchanger membrane region domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505690.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EC02
    Conserved Domains (1) summary
    pfam01699
    Location:486642
    Na_Ca_ex; Sodium/calcium exchanger protein