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arrd-15 Arrestin C-terminal-like domain-containing protein;Arrestin domain-containing protein 15 [ Caenorhabditis elegans ]

Gene ID: 191372, updated on 9-Dec-2024

Summary

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Official Symbol
arrd-15
Official Full Name
Arrestin C-terminal-like domain-containing protein;Arrestin domain-containing protein 15
Primary source
WormBase:WBGene00014033
Locus tag
CELE_ZK643.1
See related
AllianceGenome:WB:WBGene00014033
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in protein transport. Located in striated muscle dense body. Is expressed in ganglia; neurons; and vm1. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See arrd-15 in Genome Data Viewer
Location:
chromosome: III
Exon count:
10
Sequence:
Chromosome: III; NC_003281.10 (8930023..8936746)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Globin-like protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene G_PROTEIN_RECEP_F2_4 domain-containing protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The α-arrestin SUP-13/ARRD-15 promotes isoform turnover of actin-interacting protein 1 in Caenorhabditis elegans striated muscle. Lewis M, et al. PNAS Nexus, 2023 Oct. PMID 37869480, Free PMC Article
  2. Distinct patterns of gene and protein expression elicited by organophosphorus pesticides in Caenorhabditis elegans. Lewis JA, et al. BMC Genomics, 2009 Apr 29. PMID 19402892, Free PMC Article
  3. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in striated muscle dense body HDA PubMed 

General protein information

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Preferred Names
Arrestin C-terminal-like domain-containing protein;Arrestin domain-containing protein 15
NP_001254968.1
  • Confirmed by transcript evidence
NP_001254969.1
  • Confirmed by transcript evidence
NP_001254970.1
  • Confirmed by transcript evidence
NP_001254971.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    8930023..8936746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001268039.4 → NP_001254968.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254968.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I2HAB8
    Conserved Domains (2) summary
    pfam02752
    Location:181 → 316
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:32 → 131
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain

  2. NM_001268040.4 → NP_001254969.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254969.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I2HAB9
    Conserved Domains (2) summary
    pfam02752
    Location:194 → 329
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:45 → 144
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain

  3. NM_001268041.4 → NP_001254970.1  Arrestin domain-containing protein 15 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254970.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C9IY19, C9IY20, P30647
    Conserved Domains (2) summary
    pfam02752
    Location:198 → 330
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:49 → 148
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain

  4. NM_001268042.3 → NP_001254971.1  Arrestin domain-containing protein 15 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254971.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P30647
    Conserved Domains (2) summary
    pfam02752
    Location:166 → 298
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:17 → 116
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P30647.2

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