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Y113G7B.12 Reverse transcriptase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 190975, updated on 2-Nov-2024

Summary

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Official Symbol
Y113G7B.12
Official Full Name
Reverse transcriptase domain-containing protein
Primary source
WormBase:WBGene00013762
Locus tag
CELE_Y113G7B.12
See related
AllianceGenome:WB:WBGene00013762
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable RNA-directed DNA polymerase activity. Predicted to be involved in RNA-templated DNA biosynthetic process. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y113G7B.12 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (20208691..20212684, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene Activin_recp domain-containing protein Neighboring gene tRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables RNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
  
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in RNA-templated DNA biosynthetic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Reverse transcriptase domain-containing protein
NP_507901.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    20208691..20212684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075500.4 → NP_507901.2  Reverse transcriptase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507901.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NAL5
    Conserved Domains (4) summary
    PHA02664
    Location:114 → 238
    PHA02664; hypothetical protein; Provisional
    pfam00078
    Location:786 → 954
    RVT_1; Reverse transcriptase (RNA-dependent DNA polymerase)
    pfam03372
    Location:311 → 526
    Exo_endo_phos; Endonuclease/Exonuclease/phosphatase family
    pfam05285
    Location:218 → 292
    SDA1; SDA1
Nucleotide Protein
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