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Y55F3BR.2 BPTI/Kunitz inhibitor domain-containing protein;EB domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 190314, updated on 4-Jan-2025

Summary

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Official Symbol
Y55F3BR.2
Official Full Name
BPTI/Kunitz inhibitor domain-containing protein;EB domain-containing protein
Primary source
WormBase:WBGene00021939
Locus tag
CELE_Y55F3BR.2
See related
AllianceGenome:WB:WBGene00021939
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Y55F3BR.2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
23
Sequence:
Chromosome: IV; NC_003282.8 (858930..874724)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat and LEM domain-containing protein 2 homolog Neighboring gene Ground-like domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ATP-dependent RNA helicase DDX1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
BPTI/Kunitz inhibitor domain-containing protein;EB domain-containing protein
NP_001294458.1
  • Confirmed by transcript evidence
NP_001294459.1
  • Confirmed by transcript evidence
NP_001294460.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    858930..874724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001307529.2 → NP_001294458.1  BPTI/Kunitz inhibitor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294458.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PMC3
    Conserved Domains (4) summary
    smart00131
    Location:649 → 703
    KU; BPTI/Kunitz family of serine protease inhibitors
    pfam00014
    Location:544 → 595
    Kunitz_BPTI; Kunitz/Bovine pancreatic trypsin inhibitor domain
    pfam01683
    Location:1246 → 1297
    EB; EB module
    cl00101
    Location:756 → 813
    KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

  2. NM_001307530.3 → NP_001294459.1  BPTI/Kunitz inhibitor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294459.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PRM5
    Conserved Domains (4) summary
    smart00131
    Location:356 → 410
    KU; BPTI/Kunitz family of serine protease inhibitors
    pfam00014
    Location:251 → 302
    Kunitz_BPTI; Kunitz/Bovine pancreatic trypsin inhibitor domain
    pfam01683
    Location:953 → 1004
    EB; EB module
    cl00101
    Location:463 → 520
    KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

  3. NM_001307531.3 → NP_001294460.1  EB domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294460.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PER8
    Conserved Domains (1) summary
    pfam01683
    Location:465 → 516
    EB; EB module
Nucleotide Protein
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