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aat-9 Amino acid transporter [ Caenorhabditis elegans ]

Gene ID: 190250, updated on 2-Nov-2024

Summary

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Official Symbol
aat-9
Official Full Name
Amino acid transporter
Primary source
WormBase:WBGene00000010
Locus tag
CELE_Y53H1C.1
See related
AllianceGenome:WB:WBGene00000010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Located in cell surface. Is expressed in body wall musculature and neurons. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See aat-9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
12
Sequence:
Chromosome: I; NC_003279.8 (11388682..11396662, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene U1-type domain-containing protein Neighboring gene Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene BRO1 domain-containing protein Neighboring gene ncRNA Neighboring gene protein of unknown function WSN domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Aromatic amino acid transporter AAT-9 of Caenorhabditis elegans localizes to neurons and muscle cells. Veljkovic E, et al. J Biol Chem, 2004 Nov 19. PMID 15364921
  2. Functional characterization of Caenorhabditis elegans heteromeric amino acid transporters. Veljkovic E, et al. J Biol Chem, 2004 Feb 27. PMID 14668347
  3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AAT-9 is expressed in excitable cells of the nematode head and pharynx in which it may provide a pathway for aromatic amino acid transport
    Title: Aromatic amino acid transporter AAT-9 of Caenorhabditis elegans localizes to neurons and muscle cells.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables L-amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in L-alpha-amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in amino acid transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cell surface IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Amino acid transporter
NP_001021788.1
  • Confirmed by transcript evidence
NP_001021789.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    11388682..11396662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026618.5 → NP_001021789.1  Amino acid transporter [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021789.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q56VY0
    Conserved Domains (1) summary
    TIGR00911
    Location:19 → 477
    2A0308; L-type amino acid transporter

  2. NM_001026617.5 → NP_001021788.1  Amino acid transporter [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021788.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NA91
    Conserved Domains (1) summary
    TIGR00911
    Location:19 → 477
    2A0308; L-type amino acid transporter
Nucleotide Protein
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