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Y49E10.21 Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1 [ Caenorhabditis elegans ]

Gene ID: 190069, updated on 18-Sep-2024

Summary

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Official Symbol
Y49E10.21
Official Full Name
Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1
Primary source
WormBase:WBGene00013040
Locus tag
CELE_Y49E10.21
See related
AllianceGenome:WB:WBGene00013040
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See Y49E10.21 in Genome Data Viewer
Location:
chromosome: III
Exon count:
7
Sequence:
Chromosome: III; NC_003281.10 (12457597..12466517)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Anillin-like protein 1 Neighboring gene Sensory neuron membrane protein 2 Neighboring gene Phosphoryl Seryl-TRNA (Ser/Sec) Kinase Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1
NP_001255173.1
  • Confirmed by transcript evidence
NP_001367267.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    12457597..12466517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001268244.3 → NP_001255173.1  Conserved oligomeric Golgi complex subunit 7 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255173.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XTU2
    Conserved Domains (1) summary
    COG1196
    Location:2 → 167
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. NM_001379954.3 → NP_001367267.1  RAD50-interacting protein 1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1B6W2
    Conserved Domains (1) summary
    COG1196
    Location:2 → 167
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
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