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Y40B10B.1 Vitelline membrane outer layer protein 1 [ Caenorhabditis elegans ]

Gene ID: 189790, updated on 9-Dec-2024

Summary

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Official Symbol
Y40B10B.1
Official Full Name
Vitelline membrane outer layer protein 1
Primary source
WormBase:WBGene00021494
Locus tag
CELE_Y40B10B.1
See related
AllianceGenome:WB:WBGene00021494
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in extracellular space. Orthologous to human VMO1 (vitelline membrane outer layer 1 homolog). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Y40B10B.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (1960045..1961553, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class J Neighboring gene Long-chain-fatty-acid--CoA ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Vitelline membrane outer layer protein 1
NP_503538.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1960045..1961553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071137.2 → NP_503538.1  Vitelline membrane outer layer protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503538.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9UAX2
    Conserved Domains (2) summary
    cd00220
    Location:20 → 196
    VMO-I; Vitelline membrane outer layer protein I (VMO-I) domain, VMO-I is one of the proteins found in the outer layer of the vitelline membrane of poultry eggs; VMO-I, lysozyme, and VMO-II are tightly bound to ovomucin; this complex forms the backbone of the ...
    pfam03762
    Location:22 → 195
    VOMI; Vitelline membrane outer layer protein I (VOMI)
Nucleotide Protein
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