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Y39G8B.5 IkappaB kinase [ Caenorhabditis elegans ]

Gene ID: 189764, updated on 2-Nov-2024

Summary

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Official Symbol
Y39G8B.5
Official Full Name
IkappaB kinase
Primary source
WormBase:WBGene00012726
Locus tag
CELE_Y39G8B.5
See related
AllianceGenome:WB:WBGene00012726
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in protein phosphorylation. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y39G8B.5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (13987499..13991841, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ShKT domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ShKT domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
IkappaB kinase
NP_496929.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    13987499..13991841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064528.3 → NP_496929.2  IkappaB kinase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496929.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U2J3
    Conserved Domains (1) summary
    cl21453
    Location:25 → 263
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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