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clec-122 C-type lectin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 189536, updated on 28-Oct-2024

Summary

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Official Symbol
clec-122
Official Full Name
C-type lectin domain-containing protein
Primary source
WormBase:WBGene00021290
Locus tag
CELE_Y25C1A.3
See related
AllianceGenome:WB:WBGene00021290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See clec-122 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (3106065..3108032)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine receptor class gamma Neighboring gene C-type lectin domain-containing protein Neighboring gene Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial Neighboring gene Metalloproteinase inhibitor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
C-type lectin domain-containing protein
NP_494447.1
  • Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    3106065..3108032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062046.1 → NP_494447.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494447.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TYL3
    Conserved Domains (2) summary
    smart00034
    Location:375 → 505
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    PRK08026
    Location:94 → 351
    PRK08026; FliC/FljB family flagellin
Nucleotide Protein
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