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W02F12.2 Alkaline ceramidase [ Caenorhabditis elegans ]

Gene ID: 189124, updated on 4-Jan-2025

Summary

Official Symbol
W02F12.2
Official Full Name
Alkaline ceramidase
Primary source
WormBase:WBGene00020947
Locus tag
CELE_W02F12.2
See related
AllianceGenome:WB:WBGene00020947
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable N-acylsphingosine amidohydrolase activity. Predicted to be involved in ceramide catabolic process and sphingosine biosynthetic process. Predicted to be located in Golgi membrane. Orthologous to several human genes including ACER1 (alkaline ceramidase 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See W02F12.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (6695177..6697652, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Metallothionein-1 Neighboring gene Metallothionein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Embryonic mRna (mRNA) Anterior Neighboring gene Exonuclease domain-containing protein

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables N-acylsphingosine amidohydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables N-acylsphingosine amidohydrolase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in ceramide catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in sphingolipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in sphingosine biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in Golgi membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Alkaline ceramidase
NP_001370798.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    6695177..6697652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383326.2NP_001370798.1  Alkaline ceramidase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O45145
    Conserved Domains (1) summary
    pfam05875
    Location:18265
    Ceramidase