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T24A6.16 LisH domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 188833, updated on 4-Jan-2025

Summary

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Official Symbol
T24A6.16
Official Full Name
LisH domain-containing protein
Primary source
WormBase:WBGene00020753
Locus tag
CELE_T24A6.16
See related
AllianceGenome:WB:WBGene00020753
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process and positive regulation of response to oxidative stress. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See T24A6.16 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (3561460..3562924, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene GNAT family N-acetyltransferase Neighboring gene pseudo Neighboring gene UBC core domain-containing protein Neighboring gene UBC core domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables chondroitin 4-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in positive regulation of response to oxidative stress IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
LisH domain-containing protein
NP_001309660.1
  • Confirmed by transcript evidence
NP_504002.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3561460..3562924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071601.3 → NP_504002.2  LisH domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504002.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O61952
    Conserved Domains (1) summary
    pfam03567
    Location:52 → 286
    Sulfotransfer_2; Sulfotransferase family

  2. NM_001322536.1 → NP_001309660.1  LisH domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MCY9
    Conserved Domains (1) summary
    cl22970
    Location:1 → 81
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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